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Query/Create interaction networks |
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What you will learn from this
tutorial:
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How to exploratory navigate the
interaction network starting with the protein/gene you interested
in.
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Find the different level of neighbors
for a given list of genes/proteins, and how to check whether the
genes/proteins are connected
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Find the connections between a given
set of genes/proteins
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Create your own network using the
edge list format
Start the Tutorial |
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Use VisANT to visualize networks in your own web site |
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What you will learn from this
tutorial:
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Add a simple HTTP link to visualize
your data in VisANT
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Embedding VisANT applet in your web
page with customizable VisANT applet parameters and scriptable APIs
to control the VisANT
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Creating a server to visualize your
own interaction database in VisANT
Start the Tutorial |
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Visualize the edge weight |
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What you will learn from this
tutorial:
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Visualize edge weight using edge
color, edge thickness, or both
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Add weighted interaction using
edge-list format
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Visualize method-dependent edge
weight
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Using weight cutoff to filter the
network
Start the Tutorial |
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Using batch mode to automate the analyses |
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What you will learn from this
tutorial:
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How to run VisANT in the batch mode
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How to prepare the command file
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Learn the most common commands
Start the Tutorial |
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Create the multiscale networks |
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What you will learn from this
tutorial:
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How to create/delete metanode
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How to manipulate the metagraph
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How to create metanode using extended
edge-list format
Start the Tutorial |
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Create pretty network using simple edge-list |
Screen Short |
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Edge-list probably is the most common format being used to create
the network for user's own data because of its simplicity and
flexibility. What
you will learn from this tutorial:
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Using simple edge-list to create the
network for your own data
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Using macros to
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How to manipulate the metagraph
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How to create metanode using extended
edge-list format
Start the Tutorial |
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Edge Annotation |
Screen Short |
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What you will learn from this
tutorial:
Start Flash Tutorial |
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